Credit card charges should always be entered in the Credit Card screen in BillQuick (Plus editions) because then they are specifically posted to the credit card liability account and later available for reconciliation purposes. There is no need to create a vendor bill for your credit card charges and then pay it using the Pay Bills screen (check payment). This transaction will not show in the Reconcile screen and you can end up creating duplicate entries and liabilities.
Hence, to resolve this issue, follow these steps:
1. Delete the existing check from the Write Checks screen and the corresponding bill from the Vendor Bills screen in BillQuick Plus.
2. Ensure you have recorded the credit card charges in the Credit Card screen.
3. In the Write Checks screen, pay your credit card charges as shown below.
4. Make the check payable to the credit card vendor and select the correct Account on the grid from which to make this payment.
5. Next, open the Reconcile Accounts screen. 
6. Make sure the Statement Date and Ending Balance is correct. Click Next.
7. Click Refresh to see the check to be reconciled. 
8. Check the Clear box in the 'Payments and Credits' section for this check.
9. Finally, select Reconcile Now option to complete your reconciliation.
